{
    "major_version": 5,
    "minor_version": 2,
    "patch_version": 0,
    "run_name": "Spinal_Run3",
    "run_start_time": "2025-06-18T21:50:18Z",
    "region_name": "Reg1_CombA_M1F2_675",
    "preservation_method": "fresh_frozen",
    "num_cells": 214194,
    "transcripts_per_cell": 123,
    "transcripts_per_100um": 220.47190785187271,
    "region_area": 264522665.62124997,
    "total_cell_area": 19288479.160152912,
    "thickness_of_high_quality_decoded_transcripts": 4.858337775935834,
    "non_zero_matrix_entries": 11906541,
    "nuclear_transcripts_per_100um": 253.4758612626735,
    "num_transcripts": 75189147,
    "num_transcripts_high_quality": 72117370,
    "fraction_transcripts_assigned": 0.5896731675045832,
    "segmented_cell_stain_frac": 0.9245076892910166,
    "segmented_cell_boundary_frac": 0.006783570034641493,
    "segmented_cell_interior_frac": 0.9177241192563751,
    "segmented_cell_nuc_expansion_frac": 0.07549231070898345,
    "imported_cell_frac": 0.0,
    "cassette_name": "CombA_M1F2_675_250618",
    "slide_id": "0068675",
    "panel_type": "custom",
    "panel_design_id": "JRE76X",
    "panel_predesigned_id": "",
    "panel_designer_version": "3.5.2",
    "panel_name": "mMulti_480g",
    "panel_organism": "Mouse",
    "panel_tissue_type": "Multi",
    "panel_num_targets_predesigned": 0,
    "panel_num_targets_custom": 480,
    "chemistry_version": "v1",
    "pixel_size": 0.2125,
    "instrument_sn": "XETG00557",
    "instrument_sw_version": "3.3.0.1",
    "analysis_sw_version": "xenium-3.3.0.1",
    "analysis_uuid": "3ad6344d-2f9c-4c03-a334-885c001bb038",
    "experiment_uuid": "6610137a-a6f9-4131-ac50-ee5dd7b69020",
    "cassette_uuid": "771d2230-2c91-4f99-a2ac-306d827cde87",
    "roi_uuid": "b6523bf8-e483-45ef-9c12-e1a35c955409",
    "z_step_size": 3.0,
    "well_uuid": "def_e1fd3522_rec_e4bac68d",
    "calibration_uuid": "d7b908b3-3478-430b-8d34-635f648b7d7a",
    "images": {
        "morphology_filepath": "morphology.ome.tif",
        "morphology_focus_filepath": "morphology_focus/morphology_focus_0000.ome.tif"
    },
    "xenium_explorer_files": {
        "transcripts_zarr_filepath": "transcripts.zarr.zip",
        "cells_zarr_filepath": "cells.zarr.zip",
        "cell_features_zarr_filepath": "cell_feature_matrix.zarr.zip",
        "analysis_zarr_filepath": "analysis.zarr.zip",
        "analysis_summary_filepath": "analysis_summary.html"
    },
    "segmentation_stain": "Xenium Multi-Tissue Stain"
}